Binh Huy Le, Zhigang Deng, James Xia, Yu-Bing Chang, Xiaobo Zhou
An Interactive Geometric Technique for Upper and Lower Teeth Segmentation.
MICCAI (1) 2009: 968-975

Hong Zhao, Kemi Cui, Fang Nie, Guangxu Jin, Fuhai Li, Lingyun Wu, Lulu Wang, Miriam B. Brandl, Sufang Zhang, Yong Mao, Nalan Yildirim, Anyang Sun, Stephen TC Wong*.
Effects of rapamycin on breast cancer cell migration through the cross-talk of MAPK pathway.
32nd Annual San Antonio Breast Cancer Symposium, December 9 - 13, 2009 in San Antonio, Texas.

Guangxu Jin, Xiaobo Zhou, Hong Zhao, Stephen, T.C., Wong*.
Signal-transduction based network biomarkers for tumor-initiating cells in a p53-Null mouse model of breast cancer.
32nd Annual San Antonio Breast Cancer Symposium, December 9 - 13, 2009 in San Antonio, Texas.

Xiaofeng Xia, Jian Yang, Fuhai Li, Xiaobo Zhou, Stephen T Wong*.
Study of the Effect of Micro-Environment Stresses on Breast Tumor initiating Cells by In Vitro Cell Tracking.
32nd Annual San Antonio Breast Cancer Symposium, December 9 - 13, 2009 in San Antonio, Texas.

Annie M. Tang, Kelvin K. Wong, Jeyarama Ananta, Edmund Y. Lam, Lon J. Wilson, Stephen T.C. Wong.
Comparison of Gadolinium Loaded and Empty Carbon Nanotubes as High Performance MRI Contrast Agent.
2009 World Molecular Imaging Congress,September 23-26, 2009 Montreal, Canada

Kelvin K. Wong, Jiacheng Liu, Ching-Hsuan Tung, Stephen T. Wong.
In Vivo Molecular Microendoscopy in Human Lung Cancer Mouse Model.
2009 World Molecular Imaging Congress,September 23-26, 2009 Montreal, Canada

F Li, X Zhou, H Zhao, and STC Wong
Cell Segmentation Using Front Vector Flow Guided Active Contours.
in 12th International Conference on Medical Image Computing and Computer Assisted Intervention (MICCAI 2009): London, UK, Sep. 20-24, 2009.

H. Li, Z. Xue, L. Guo, S.T.C. Wong
Simultaneous Consideration of Spatial Deformation and Tensor Orientation in Diffusion Tensor Image Registration Using Local Fast Marching Patterns.
In Information Processing in Medical Imaging, IPMI 2009, Williamsburg, VA, July 5-10, 2009, pp.63-75.

Q Li, X Zhou, Z Deng, M Baron, M A. Teylan, Y. Kim and STC Wong
A Novel Surface-based Geometric Approach for 3D Dentritic Spline Detection From Multi-Photon Excitation Microscopy Images.
Sixth IEEE International Symposium on Biomedical Imaging (ISBI 2009), Boston, USA, June 28 – July 1, 2009

P Shi, X Zhou, Q Li, M Baron, MA Teylan, Y Kim and STC Wong
Online Three-dimensional Dendritic Spines Morphological Classification Based on Semi-supervised Learning.
Sixth IEEE International Symposium on Biomedical Imaging (ISBI 2009), Boston, USA, June 28 – July 1, 2009

Peng H, Zhou X, Li F, Xia X, Wong ST.
Integrating Multi-scale Blob/Curvilinear Detector Techniques and Multi-level Sets for Automated Segmentation of Stem Cell Images.
Proc IEEE Int Symp Biomed Imaging. 2009 Summer;2009:1362-1365.

X. Zhu, Z. Xue, X. Gao, Y. Zhu, S.T.C. Wong.
VOLES: Vascularity-Oriented LEvel Set Algorithm for Pulmonary Vessel Segmentation in Image Guided Intervention Therapy.
Sixth IEEE International Symposium on Biomedical Imaging (ISBI 2009), Boston, USA, June 28-July 1, 2009.

Zheng Yin , Xiaobo Zhou, Stephen TC Wong
An integrative pipeline for automated data analysis and gene function annotation for genome wide high content RNAi screening.
17th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 8th European Conference on Computational Biology (ECCB); ISMB/ECCB 2009, Stockholm, Sweden; June 27-July 2, 2009.

Di Huang , Xiaobo Zhou, Stephen TC Wong
Inferring cancer-associated signaling networks based on significance analysis of microRNA-mRNA targeting.
17th Annual International Conference on Intelligent Systems for Molecular Biology (ISMB) & 8th European Conference on Computational Biology (ECCB); ISMB/ECCB 2009, Stockholm, Sweden; June 27-July 2, 2009.

Mario F. Dulay, Amit Verma, Cristof Karmonik, Zhong Xue, Adriana M. Strutt, Michele K. York, Hani Haykal, Robert G. Grossman
Material Specific Memory Impairment Is Associated with Unilateral Cingulum Bundle Structural Integrity in Intractable Temporal Lobe Epilepsy.
61st Annual Meeting of the American Academy of Neurology, Apr 25-May 2, 2009.

X. Hu, K. Wong, P. New and S. Wong
Improved rCBV calculation with leakage correction and first pass extraction.
17th Scientific Meeting and Exhibition, International Society for Magnetic Resonance in Medicine (ISMRM 2009), Honolulu, USA, 18-24 April 2009

X. Hu, G. Young, S. Wong, and K. Wong
Automatic Identification of Radiation Necrosis in Resected GBM Patients using Cost-Sensitive OC-SVM Classifier.
17th Scientific Meeting and Exhibition, International Society for Magnetic Resonance in Medicine (ISMRM 2009), Honolulu, USA, 18-24 April 2009.

D Beck, X Zhou, T Pham, B Sabatini and STC Wong
An Image Driven Systems Biology Approach for Neurodegenerative Disease Studies in the TSC-mTOR Pathway.
in Fourth IEEE/NIH Life Science Systems & Application Workshop (LiSSA 2009), Natcher Conference Center, the National Institutes of Health, Bethesda, Maryland, USA, April 09 – 10, 2009

Y Huang, X Zhou, B Miao, M Lipinski, Z Xia, G Hu, A Degterev, J Yuan and STC Wong
An Image Based System Biology Approach for Alzheimer’s Disease Pathway Analysis.
in Fourth IEEE/NIH Life Science Systems & Application Workshop (LiSSA 2009), Natcher Conference Center, the National Institutes of Health, Bethesda, Maryland, USA, April 09 – 10, 2009

H. Li, Z. Xue, J. Xing, L. Guo, S.T.C. Wong
Analyzing the Diffusion Patterns for Follow-Up Study of Gliobrastoma Multiforme Using Diffusion Tensor Imaging.
The IEEE/NIH 2009 LIfe Science Systems and Applications Workshop (LiSSA 2009), Bethesda, MD, Apr 9-10, 2009.

Xianwen Ren, Xiaobo Zhou, Lingyun Wu, Xiang-sun Zhng, Stephen TC Wong, Chung-Che (Jeff) Chang
The pathogenesis of myelodysplastic syndromes (MDS): insights from a network view.
In: Proceedings of the 100th Annual Meeting of the American Association for Cancer Research; AACR; Denver, CO. Philadelphia (PA) 2009, p. Poster. 3294.

Kemi Cui*, Guangxu Jin* (Co-first), Hong Zhao, Fuhai Li, Lulu Wang, Xiaobo Zhou, Stephen TC Wong.
Knowledge-based metastatic prostate cancer targets discovery.
In: Proceedings of the 100th Annual Meeting of the American Association for Cancer Research; 2009 Apr 18-22; Denver, CO. Philadelphia (PA): AACR; 2009. Abstract nr 2452

Zhao H, Jin G, Wong H, Cui K, Li F, Zhang S, Wong S, Zhou X, Chang J, Wong S.
Drug reposition for brain metastasis of breast cancer.
100th Annual Meeting AACR. 2009 Apr. Denvor, USA

Cui K, Jin G, Zhao H, Li F, Wang L, Zhou X, Wong S.
Mechanism-based metastatic prostate cancer targets discovery.
100th Annual Meeting AACR. 2009 Apr. Denvor, USA

Zhong Xue, Dinggang Shen, Stephen TC Wong
Tissue Probability Map Constrained CLASSIC for Increased Accuracy and Robustness in Serial Image Segmentation.
Proc. SPIE, Vol. 7259, 2009

Zhao H, Cui K, Xia W, Wong STC.
γ-secretase inhibitors affect tumorigenesis in Zebrafish: a high throughput bioluminescence imaging study.
3rd Strategic Conference of Zebrafish Investigators, Monterey, California, January, 2009

Cai M, Zhao H, Zhou X, Wong STC.
Mathematic modeling of drug combination effects using protein-protein interaction sub-networks.
The IASTED International Conference on Modeling, Simulation and Identification (MSI) 2009, Beijing China (accepted)